Cluster: MGYG000001887_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- CGC Family ID: CGCFAM_04793
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000001887_14 | MGYG000001887_14_31 | 31942 | 34572 | - | 4.A.2.1.17 |
| TC | MGYG000001887_14 | MGYG000001887_14_32 | 35599 | 36306 | + | 3.A.1.3.15 |
| TC | MGYG000001887_14 | MGYG000001887_14_33 | 36319 | 37080 | + | 3.A.1.3.24 |
| CAZyme | MGYG000001887_14 | MGYG000001887_14_34 | 37164 | 38168 | + | GT4 |
| pfam | MGYG000001887_14 | MGYG000001887_14_35 | 38239 | 39003 | - | Metallophos |
| pfam | MGYG000001887_14 | MGYG000001887_14_36 | 39111 | 39602 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | MGYG000001887_14 | MGYG000001887_14_37 | 39730 | 41508 | - | 2.A.58.2.2 |
Gene ID: MGYG000001887_14_31
Type: TC
Location: 31942 - 34572 (-)
Type: TC
Location: 31942 - 34572 (-)
Gene ID: MGYG000001887_14_32
Type: TC
Location: 35599 - 36306 (+)
Type: TC
Location: 35599 - 36306 (+)
Gene ID: MGYG000001887_14_33
Type: TC
Location: 36319 - 37080 (+)
Type: TC
Location: 36319 - 37080 (+)
Gene ID: MGYG000001887_14_34
Type: CAZyme
Location: 37164 - 38168 (+)
Type: CAZyme
Location: 37164 - 38168 (+)
Gene ID: MGYG000001887_14_35
Type: pfam
Location: 38239 - 39003 (-)
Type: pfam
Location: 38239 - 39003 (-)
Gene ID: MGYG000001887_14_36
Type: pfam
Location: 39111 - 39602 (-)
Type: pfam
Location: 39111 - 39602 (-)
Gene ID: MGYG000001887_14_37
Type: TC
Location: 39730 - 41508 (-)
Type: TC
Location: 39730 - 41508 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.