Cluster: MGYG000001887_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000001887
- CGC Family ID: CGCFAM_00384
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001887_3 | MGYG000001887_3_82 | 79684 | 80940 | + | GH5_4 |
| pfam | MGYG000001887_3 | MGYG000001887_3_83 | 81601 | 84297 | + | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 |
| TC | MGYG000001887_3 | MGYG000001887_3_84 | 85114 | 85470 | - | 3.A.5.1.1 |
Gene ID: MGYG000001887_3_82
Type: CAZyme
Location: 79684 - 80940 (+)
Type: CAZyme
Location: 79684 - 80940 (+)
Gene ID: MGYG000001887_3_83
Type: pfam
Location: 81601 - 84297 (+)
Type: pfam
Location: 81601 - 84297 (+)
Gene ID: MGYG000001887_3_84
Type: TC
Location: 85114 - 85470 (-)
Type: TC
Location: 85114 - 85470 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.