Cluster: MGYG000001887_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000001887
- CGC Family ID: CGCFAM_01880
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001887_48 | MGYG000001887_48_4 | 2228 | 2851 | - | CE4 |
| NULL(UNKNOWN) | MGYG000001887_48 | MGYG000001887_48_5 | 2867 | 3499 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000001887_48 | MGYG000001887_48_6 | 3493 | 4920 | - | 2.A.66.1.33 |
| CAZyme | MGYG000001887_48 | MGYG000001887_48_7 | 5154 | 6494 | + | GH25 |
| pfam | MGYG000001887_48 | MGYG000001887_48_8 | 6527 | 7624 | + | YhcG_C | DUF1016_N |
| TC | MGYG000001887_48 | MGYG000001887_48_9 | 7686 | 9080 | - | 2.A.66.1.37 |
Gene ID: MGYG000001887_48_4
Type: CAZyme
Location: 2228 - 2851 (-)
Type: CAZyme
Location: 2228 - 2851 (-)
Gene ID: MGYG000001887_48_5
Type:
Location: 2867 - 3499 (-)
Type:
Location: 2867 - 3499 (-)
Gene ID: MGYG000001887_48_6
Type: TC
Location: 3493 - 4920 (-)
Type: TC
Location: 3493 - 4920 (-)
Gene ID: MGYG000001887_48_7
Type: CAZyme
Location: 5154 - 6494 (+)
Type: CAZyme
Location: 5154 - 6494 (+)
Gene ID: MGYG000001887_48_8
Type: pfam
Location: 6527 - 7624 (+)
Type: pfam
Location: 6527 - 7624 (+)
Gene ID: MGYG000001887_48_9
Type: TC
Location: 7686 - 9080 (-)
Type: TC
Location: 7686 - 9080 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.