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Cluster: MGYG000001887_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000001887_15 MGYG000001887_15_42 34105 34929 + 3.A.1.132.3
TF MGYG000001887_15 MGYG000001887_15_43 35032 36018 + HTH_11
TC MGYG000001887_15 MGYG000001887_15_44 36036 37298 + 2.A.49.9.2
STP MGYG000001887_15 MGYG000001887_15_45 37446 37967 + Sigma70_r2 | Sigma70_r4_2
pfam MGYG000001887_15 MGYG000001887_15_46 37973 38662 + DUF4367
CAZyme MGYG000001887_15 MGYG000001887_15_47 38753 39985 + CE2
TC MGYG000001887_15 MGYG000001887_15_48 40168 42888 + 1.B.52.2.2
pfam MGYG000001887_15 MGYG000001887_15_49 43185 43601 + OAD_gamma
TC MGYG000001887_15 MGYG000001887_15_50 43630 44868 + 3.B.1.1.3
Gene ID: MGYG000001887_15_42
Type: TC
Location: 34105 - 34929 (+)
Gene ID: MGYG000001887_15_43
Type: TF
Location: 35032 - 36018 (+)
Gene ID: MGYG000001887_15_44
Type: TC
Location: 36036 - 37298 (+)
Gene ID: MGYG000001887_15_45
Type: STP
Location: 37446 - 37967 (+)
Gene ID: MGYG000001887_15_46
Type: pfam
Location: 37973 - 38662 (+)
Gene ID: MGYG000001887_15_47
Type: CAZyme
Location: 38753 - 39985 (+)
Gene ID: MGYG000001887_15_48
Type: TC
Location: 40168 - 42888 (+)
Gene ID: MGYG000001887_15_49
Type: pfam
Location: 43185 - 43601 (+)
Gene ID: MGYG000001887_15_50
Type: TC
Location: 43630 - 44868 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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