Cluster: MGYG000001887_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000001887
- CGC Family ID: CGCFAM_00011
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000001887_19 | MGYG000001887_19_1 | 612 | 1412 | + | GT2 |
| CAZyme | MGYG000001887_19 | MGYG000001887_19_2 | 1412 | 2434 | + | GT2 |
| TC | MGYG000001887_19 | MGYG000001887_19_3 | 2446 | 3246 | + | 3.A.1.103.4 |
| TC | MGYG000001887_19 | MGYG000001887_19_4 | 3260 | 4000 | + | 3.A.1.103.1 |
| CAZyme | MGYG000001887_19 | MGYG000001887_19_5 | 4233 | 6125 | + | GT2 |
Gene ID: MGYG000001887_19_1
Type: CAZyme
Location: 612 - 1412 (+)
Type: CAZyme
Location: 612 - 1412 (+)
Gene ID: MGYG000001887_19_2
Type: CAZyme
Location: 1412 - 2434 (+)
Type: CAZyme
Location: 1412 - 2434 (+)
Gene ID: MGYG000001887_19_3
Type: TC
Location: 2446 - 3246 (+)
Type: TC
Location: 2446 - 3246 (+)
Gene ID: MGYG000001887_19_4
Type: TC
Location: 3260 - 4000 (+)
Type: TC
Location: 3260 - 4000 (+)
Gene ID: MGYG000001887_19_5
Type: CAZyme
Location: 4233 - 6125 (+)
Type: CAZyme
Location: 4233 - 6125 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Ruminiclostridium_E
Species
Ruminiclostridium_E sp003512525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.