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Genome Details

Selected Rep_genome_ID: HRGMv2_4008
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_4008 2,553,240 95.71% 0.724% Italy Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_4008_CGC6 CGCFAM_00001 Yes 8 5 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_4008_CGC21 CGCFAM_00016 Yes 7 1 host glycan
HRGMv2_4008_CGC4 CGCFAM_00017 Yes 7 3 fructan
HRGMv2_4008_CGC28 CGCFAM_00034 Yes 7 4
HRGMv2_4008_CGC16 CGCFAM_00062 Yes 5 2 beta-glucan
HRGMv2_4008_CGC37 CGCFAM_00180 Yes 6 2
HRGMv2_4008_CGC38 CGCFAM_00181 Yes 7 3
HRGMv2_4008_CGC8 CGCFAM_00256 Yes 6 2
HRGMv2_4008_CGC22 CGCFAM_00337 Yes 8 2
HRGMv2_4008_CGC33 CGCFAM_00495 Yes 3 2
HRGMv2_4008_CGC41 CGCFAM_00521 Yes 10 1
HRGMv2_4008_CGC34 CGCFAM_00612 Yes 8 2
HRGMv2_4008_CGC19 CGCFAM_00699 Yes 5 1
HRGMv2_4008_CGC24 CGCFAM_01216 Yes 3 2
HRGMv2_4008_CGC47 CGCFAM_01606 Yes 4 1
HRGMv2_4008_CGC12 CGCFAM_01701 Yes 5 2
HRGMv2_4008_CGC18 CGCFAM_01972 Yes 3 1
HRGMv2_4008_CGC25 CGCFAM_01972 Yes 4 1
HRGMv2_4008_CGC2 CGCFAM_02870 Yes 3 1
HRGMv2_4008_CGC15 CGCFAM_03494 Yes 4 1
HRGMv2_4008_CGC11 CGCFAM_04548 Yes 5 3
HRGMv2_4008_CGC46 CGCFAM_04847 Yes 6 2
HRGMv2_4008_CGC26 CGCFAM_05173 Yes 4 1
HRGMv2_4008_CGC40 CGCFAM_05833 Yes 4 1
HRGMv2_4008_CGC29 CGCFAM_09090 Yes 4 1
Top CAZyme Families