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Cluster: HRGMv2_4008_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4008_11 HRGMv2_4008_11_41 61077 64379 + 1.B.14.6.13
TC HRGMv2_4008_11 HRGMv2_4008_11_42 64417 65985 + 8.A.46.2.1
CAZyme HRGMv2_4008_11 HRGMv2_4008_11_43 66017 67021 + GH18
pfam HRGMv2_4008_11 HRGMv2_4008_11_44 67043 68248 + BT_3987-like_N | Laminin_G_3
pfam HRGMv2_4008_11 HRGMv2_4008_11_45 68283 69311 + BT_3987-like_N
TC HRGMv2_4008_11 HRGMv2_4008_11_46 69839 72943 + 1.B.14.6.13
TC HRGMv2_4008_11 HRGMv2_4008_11_47 72957 74549 + 8.A.46.2.2
Gene ID: HRGMv2_4008_11_41
Type: TC
Location: 61077 - 64379 (+)
Gene ID: HRGMv2_4008_11_42
Type: TC
Location: 64417 - 65985 (+)
Gene ID: HRGMv2_4008_11_43
Type: CAZyme
Location: 66017 - 67021 (+)
Gene ID: HRGMv2_4008_11_44
Type: pfam
Location: 67043 - 68248 (+)
Gene ID: HRGMv2_4008_11_45
Type: pfam
Location: 68283 - 69311 (+)
Gene ID: HRGMv2_4008_11_46
Type: TC
Location: 69839 - 72943 (+)
Gene ID: HRGMv2_4008_11_47
Type: TC
Location: 72957 - 74549 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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