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Cluster: HRGMv2_4008_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4008_33 HRGMv2_4008_33_2 608 2164 + 2.A.17.1.3
TC HRGMv2_4008_33 HRGMv2_4008_33_3 2234 3634 - 2.A.1.53.5
TC HRGMv2_4008_33 HRGMv2_4008_33_4 3850 5469 - 2.A.1.53.5
peptidase HRGMv2_4008_33 HRGMv2_4008_33_5 5517 7688 - S09.UPC
TC HRGMv2_4008_33 HRGMv2_4008_33_6 7678 9609 - 2.A.9.3.1
peptidase HRGMv2_4008_33 HRGMv2_4008_33_7 9613 11217 - C26.964
TC HRGMv2_4008_33 HRGMv2_4008_33_8 11359 12660 + 9.B.168.1.2
TC HRGMv2_4008_33 HRGMv2_4008_33_9 12835 14718 + 3.A.3.6.5
pfam HRGMv2_4008_33 HRGMv2_4008_33_10 14769 15572 - DUF4886
CAZyme HRGMv2_4008_33 HRGMv2_4008_33_11 15592 17922 - GH92
Gene ID: HRGMv2_4008_33_2
Type: TC
Location: 608 - 2164 (+)
Gene ID: HRGMv2_4008_33_3
Type: TC
Location: 2234 - 3634 (-)
Gene ID: HRGMv2_4008_33_4
Type: TC
Location: 3850 - 5469 (-)
Gene ID: HRGMv2_4008_33_5
Type: peptidase
Location: 5517 - 7688 (-)
Gene ID: HRGMv2_4008_33_6
Type: TC
Location: 7678 - 9609 (-)
Gene ID: HRGMv2_4008_33_7
Type: peptidase
Location: 9613 - 11217 (-)
Gene ID: HRGMv2_4008_33_8
Type: TC
Location: 11359 - 12660 (+)
Gene ID: HRGMv2_4008_33_9
Type: TC
Location: 12835 - 14718 (+)
Gene ID: HRGMv2_4008_33_10
Type: pfam
Location: 14769 - 15572 (-)
Gene ID: HRGMv2_4008_33_11
Type: CAZyme
Location: 15592 - 17922 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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