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Genome Details

Selected Rep_genome_ID: HRGMv2_3879
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_3879 2,765,505 98.08% 1.32% UK Europe HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_3879_CGC16 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3879_CGC36 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3879_CGC43 CGCFAM_00001 Yes 3 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_3879_CGC25 CGCFAM_00017 Yes 8 2 fructan
HRGMv2_3879_CGC17 CGCFAM_00146 Yes 9 5
HRGMv2_3879_CGC41 CGCFAM_00148 Yes 5 2
HRGMv2_3879_CGC24 CGCFAM_00254 Yes 3 1
HRGMv2_3879_CGC37 CGCFAM_00379 Yes 3 1
HRGMv2_3879_CGC44 CGCFAM_00400 Yes 10 2
HRGMv2_3879_CGC18 CGCFAM_00437 Yes 9 1
HRGMv2_3879_CGC20 CGCFAM_00895 Yes 4 1
HRGMv2_3879_CGC32 CGCFAM_01047 Yes 6 1
HRGMv2_3879_CGC10 CGCFAM_01687 Yes 5 2
HRGMv2_3879_CGC8 CGCFAM_03195 Yes 5 1
HRGMv2_3879_CGC30 CGCFAM_03729 Yes 4 1
HRGMv2_3879_CGC46 CGCFAM_04103 Yes 4 2
HRGMv2_3879_CGC14 CGCFAM_06935 Yes 11 2
HRGMv2_3879_CGC29 CGCFAM_07216 Yes 11 2
HRGMv2_3879_CGC1 CGCFAM_08591 Yes 4 1
HRGMv2_3879_CGC11 CGCFAM_09583 Yes 21 1
HRGMv2_3879_CGC15 CGCFAM_10490 Yes 5 2
HRGMv2_3879_CGC19 CGCFAM_10491 Yes 5 2
HRGMv2_3879_CGC23 CGCFAM_10492 Yes 3 1
HRGMv2_3879_CGC27 CGCFAM_10493 Yes 8 1
HRGMv2_3879_CGC35 CGCFAM_10494 Yes 10 1
Top CAZyme Families