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Cluster: HRGMv2_3879_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3879_12 HRGMv2_3879_12_20 24422 26938 + GH43_17
NULL(UNKNOWN) HRGMv2_3879_12 HRGMv2_3879_12_21 27130 27540 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3879_12 HRGMv2_3879_12_22 27702 29006 - 3.D.5.1.1
TC HRGMv2_3879_12 HRGMv2_3879_12_23 29014 29631 - 3.D.5.1.1
TC HRGMv2_3879_12 HRGMv2_3879_12_24 29675 30301 - 3.D.5.1.1
TC HRGMv2_3879_12 HRGMv2_3879_12_25 30307 31017 - 3.D.5.1.1
TC HRGMv2_3879_12 HRGMv2_3879_12_26 31027 32235 - 3.D.5.1.1
pfam HRGMv2_3879_12 HRGMv2_3879_12_27 32263 33654 - NQRA_N | NQRA_SLBB | NQRA_2nd
TC HRGMv2_3879_12 HRGMv2_3879_12_28 34143 34979 + 1.A.30.3.1
Gene ID: HRGMv2_3879_12_20
Type: CAZyme
Location: 24422 - 26938 (+)
Gene ID: HRGMv2_3879_12_21
Type:
Location: 27130 - 27540 (-)
Gene ID: HRGMv2_3879_12_22
Type: TC
Location: 27702 - 29006 (-)
Gene ID: HRGMv2_3879_12_23
Type: TC
Location: 29014 - 29631 (-)
Gene ID: HRGMv2_3879_12_24
Type: TC
Location: 29675 - 30301 (-)
Gene ID: HRGMv2_3879_12_25
Type: TC
Location: 30307 - 31017 (-)
Gene ID: HRGMv2_3879_12_26
Type: TC
Location: 31027 - 32235 (-)
Gene ID: HRGMv2_3879_12_27
Type: pfam
Location: 32263 - 33654 (-)
Gene ID: HRGMv2_3879_12_28
Type: TC
Location: 34143 - 34979 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3879_12_22 vegan > vegetarian 1.32377 0.01605

🧭 Explore Read Mapping of CGC

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