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Cluster: HRGMv2_3879_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3879_4 HRGMv2_3879_4_40 48565 48939 + 3.D.1.8.1
TC HRGMv2_3879_4 HRGMv2_3879_4_41 48951 49532 + 3.D.1.3.1
TC HRGMv2_3879_4 HRGMv2_3879_4_42 49603 51231 + 3.D.1.5.1
TC HRGMv2_3879_4 HRGMv2_3879_4_43 51258 52334 + 3.D.1.5.1
TC HRGMv2_3879_4 HRGMv2_3879_4_44 52386 53888 + 3.A.2.1.2
pfam HRGMv2_3879_4 HRGMv2_3879_4_45 53908 54141 + ATP-synt_DE_N
TC HRGMv2_3879_4 HRGMv2_3879_4_46 54161 55270 + 3.A.2.1.6
TC HRGMv2_3879_4 HRGMv2_3879_4_47 55315 55560 + 3.A.2.1.6
pfam HRGMv2_3879_4 HRGMv2_3879_4_48 55576 56073 + ATP-synt_B | YMF19
pfam HRGMv2_3879_4 HRGMv2_3879_4_49 56083 56628 + OSCP
TC HRGMv2_3879_4 HRGMv2_3879_4_50 56638 58212 + 3.A.2.1.3
TC HRGMv2_3879_4 HRGMv2_3879_4_51 58232 59116 + 3.A.2.1.1
STP HRGMv2_3879_4 HRGMv2_3879_4_52 59153 59719 + Fer4 | Fer4
TC HRGMv2_3879_4 HRGMv2_3879_4_53 59728 60246 + 3.D.9.1.1
TC HRGMv2_3879_4 HRGMv2_3879_4_54 60253 60567 + 3.D.1.2.1
TC HRGMv2_3879_4 HRGMv2_3879_4_55 60582 62492 + 3.D.1.3.1
TC HRGMv2_3879_4 HRGMv2_3879_4_56 62527 64032 + 3.D.1.5.1
TC HRGMv2_3879_4 HRGMv2_3879_4_57 64046 65524 + 3.D.9.1.1
CAZyme HRGMv2_3879_4 HRGMv2_3879_4_58 65645 66982 + GT2
pfam HRGMv2_3879_4 HRGMv2_3879_4_59 66979 68973 + SpoIID | DUF4922 | Ap4A_phos_N
TC HRGMv2_3879_4 HRGMv2_3879_4_60 68948 70225 + 2.A.1.25.5
Gene ID: HRGMv2_3879_4_40
Type: TC
Location: 48565 - 48939 (+)
Gene ID: HRGMv2_3879_4_41
Type: TC
Location: 48951 - 49532 (+)
Gene ID: HRGMv2_3879_4_42
Type: TC
Location: 49603 - 51231 (+)
Gene ID: HRGMv2_3879_4_43
Type: TC
Location: 51258 - 52334 (+)
Gene ID: HRGMv2_3879_4_44
Type: TC
Location: 52386 - 53888 (+)
Gene ID: HRGMv2_3879_4_45
Type: pfam
Location: 53908 - 54141 (+)
Gene ID: HRGMv2_3879_4_46
Type: TC
Location: 54161 - 55270 (+)
Gene ID: HRGMv2_3879_4_47
Type: TC
Location: 55315 - 55560 (+)
Gene ID: HRGMv2_3879_4_48
Type: pfam
Location: 55576 - 56073 (+)
Gene ID: HRGMv2_3879_4_49
Type: pfam
Location: 56083 - 56628 (+)
Gene ID: HRGMv2_3879_4_50
Type: TC
Location: 56638 - 58212 (+)
Gene ID: HRGMv2_3879_4_51
Type: TC
Location: 58232 - 59116 (+)
Gene ID: HRGMv2_3879_4_52
Type: STP
Location: 59153 - 59719 (+)
Gene ID: HRGMv2_3879_4_53
Type: TC
Location: 59728 - 60246 (+)
Gene ID: HRGMv2_3879_4_54
Type: TC
Location: 60253 - 60567 (+)
Gene ID: HRGMv2_3879_4_55
Type: TC
Location: 60582 - 62492 (+)
Gene ID: HRGMv2_3879_4_56
Type: TC
Location: 62527 - 64032 (+)
Gene ID: HRGMv2_3879_4_57
Type: TC
Location: 64046 - 65524 (+)
Gene ID: HRGMv2_3879_4_58
Type: CAZyme
Location: 65645 - 66982 (+)
Gene ID: HRGMv2_3879_4_59
Type: pfam
Location: 66979 - 68973 (+)
Gene ID: HRGMv2_3879_4_60
Type: TC
Location: 68948 - 70225 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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