Cluster: HRGMv2_3879_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_3879
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3879_51 | HRGMv2_3879_51_5 | 5387 | 6844 | - | GH43_7 | GH43_7 |
| NULL(UNKNOWN) | HRGMv2_3879_51 | HRGMv2_3879_51_6 | 6841 | 7596 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3879_51 | HRGMv2_3879_51_7 | 7651 | 8826 | - | CE1 |
| NULL(UNKNOWN) | HRGMv2_3879_51 | HRGMv2_3879_51_8 | 10050 | 10460 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3879_51 | HRGMv2_3879_51_9 | 10587 | 12257 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_3879_51 | HRGMv2_3879_51_10 | 12300 | 15428 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_3879_51_5
Type: CAZyme
Location: 5387 - 6844 (-)
Type: CAZyme
Location: 5387 - 6844 (-)
Gene ID: HRGMv2_3879_51_6
Type:
Location: 6841 - 7596 (-)
Type:
Location: 6841 - 7596 (-)
Gene ID: HRGMv2_3879_51_7
Type: CAZyme
Location: 7651 - 8826 (-)
Type: CAZyme
Location: 7651 - 8826 (-)
Gene ID: HRGMv2_3879_51_8
Type:
Location: 10050 - 10460 (-)
Type:
Location: 10050 - 10460 (-)
Gene ID: HRGMv2_3879_51_9
Type: pfam
Location: 10587 - 12257 (-)
Type: pfam
Location: 10587 - 12257 (-)
Gene ID: HRGMv2_3879_51_10
Type: TC
Location: 12300 - 15428 (-)
Type: TC
Location: 12300 - 15428 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Muribaculum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.