PROTEIN: HRGMv2_3879_51_6
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Protein File & Metadata
Source:
HRGMv2_3879_51_6.pdb
Genome ID:
Protein ID:
HRGMv2_3879_51_6
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Protein Sequence
MKNSYLKNLA LSSMLALGAA GAWAQTPAPS GNNNNNFPPV RQNYEIQTPT YLSDYFVEGT 60 NPTIAPDGEG FIRRWTVLEP ISKPNRSNTV FTDSYMNHVF DTIYFKDQFK TLPKNGETVK 120 VDGKKLQWHS LDSRRYNFKL YRFAAAMKKP VYGIIWFAYT VINCEEEIQN VRLSAGSNSA 180 SKWWLDGEEV LLLSGDRRMV ADDGVSKRLT LKKGKNVLWV GVINGPGMSD FCARFVDENG 240 KPITNYTISY Q 251
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D7SFH3-F1-model_v4 | GH43_2 | 33 | 251 | 307 | 697 | 0.5503 |
0.929 |
| UPS44903.1 | CBM6 , GH43_2 | 35 | 251 | 426 | 701 | 0.541 |
0.9247 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 35 | 251 | 425 | 700 | 0.537 |
0.9157 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 44 | 251 | 451 | 1048 | 0.4847 |
0.9464 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 59 | 251 | 21 | 214 | 0.435 |
0.8463 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 66 | 240 | 458 | 622 | 0.4018 |
0.8558 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 59 | 241 | 22 | 202 | 0.3981 |
0.8396 |
| A0A380YJ87 | GH20 | 58 | 251 | 396 | 837 | 0.3891 |
0.7679 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 58 | 251 | 396 | 837 | 0.3885 |
0.7662 |
| BCM93550.1 | GH2 | 59 | 251 | 948 | 1135 | 0.3766 |
0.8153 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D7SFH3 | GH43_2 | 33 | 251 | 307 | 697 | 0.5503 |
0.929 |
| UPS44903.1 | CBM6 , GH43_2 | 35 | 251 | 426 | 701 | 0.541 |
0.9247 |
| A0A7G9XVI1 | GH43_2 , GH8 | 44 | 251 | 451 | 1048 | 0.4847 |
0.9464 |
| A0A402CZV5 | GH4 | 66 | 240 | 458 | 622 | 0.4018 |
0.8558 |
| A0A344TID5 | GH163 | 59 | 241 | 22 | 202 | 0.3981 |
0.8396 |
| A0A380YJ87 | GH20 | 58 | 251 | 396 | 837 | 0.3891 |
0.7679 |
| BCM93550.1 | GH2 | 59 | 251 | 948 | 1135 | 0.3766 |
0.8153 |
| A0A518LMX6 | GH31 | 61 | 251 | 945 | 1147 | 0.3749 |
0.8052 |
| A0A1U9NQX6 | CBM51 , GH20 | 45 | 251 | 150 | 853 | 0.3735 |
0.69 |
| A0A495VIY0 | GH2 | 60 | 251 | 931 | 1116 | 0.3731 |
0.8108 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.