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Cluster: HRGMv2_3879_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3879_19 HRGMv2_3879_19_16 17366 17992 + 2.A.124.1.4
CAZyme HRGMv2_3879_19 HRGMv2_3879_19_17 18109 20457 - GH32
pfam HRGMv2_3879_19 HRGMv2_3879_19_18 20584 22053 - DUF4960
pfam HRGMv2_3879_19 HRGMv2_3879_19_19 22072 23748 - SusD_RagB | SusD-like_3
TC HRGMv2_3879_19 HRGMv2_3879_19_20 23762 26803 - 1.B.14.6.1
TF HRGMv2_3879_19 HRGMv2_3879_19_21 27029 29773 - HTH_AraC
CAZyme HRGMv2_3879_19 HRGMv2_3879_19_22 29966 31774 + GH32
TC HRGMv2_3879_19 HRGMv2_3879_19_23 31779 32972 + 2.A.1.7.17
Gene ID: HRGMv2_3879_19_16
Type: TC
Location: 17366 - 17992 (+)
Gene ID: HRGMv2_3879_19_17
Type: CAZyme
Location: 18109 - 20457 (-)
Gene ID: HRGMv2_3879_19_18
Type: pfam
Location: 20584 - 22053 (-)
Gene ID: HRGMv2_3879_19_19
Type: pfam
Location: 22072 - 23748 (-)
Gene ID: HRGMv2_3879_19_20
Type: TC
Location: 23762 - 26803 (-)
Gene ID: HRGMv2_3879_19_21
Type: TF
Location: 27029 - 29773 (-)
Gene ID: HRGMv2_3879_19_22
Type: CAZyme
Location: 29966 - 31774 (+)
Gene ID: HRGMv2_3879_19_23
Type: TC
Location: 31779 - 32972 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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