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Cluster: HRGMv2_3879_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3879_7 HRGMv2_3879_7_29 40871 43549 + CBM20 | GH77
CAZyme HRGMv2_3879_7 HRGMv2_3879_7_30 43730 45673 - GH16_3
pfam HRGMv2_3879_7 HRGMv2_3879_7_31 45712 46635 - F5_F8_type_C
pfam HRGMv2_3879_7 HRGMv2_3879_7_32 46672 48390 - SusD_RagB | SusD-like_3
TC HRGMv2_3879_7 HRGMv2_3879_7_33 48422 51448 - 1.B.14.6.1
pfam HRGMv2_3879_7 HRGMv2_3879_7_34 51490 53415 - SusD_RagB | SusD-like_3
TC HRGMv2_3879_7 HRGMv2_3879_7_35 53442 56597 - 1.B.14.6.1
TC HRGMv2_3879_7 HRGMv2_3879_7_36 57110 57694 + 2.A.51.1.5
TC HRGMv2_3879_7 HRGMv2_3879_7_37 57694 58224 + 2.A.51.1.6
pfam HRGMv2_3879_7 HRGMv2_3879_7_38 58231 59493 + Mur_ligase_C | Mur_ligase_M
TC HRGMv2_3879_7 HRGMv2_3879_7_39 59579 61369 - 2.A.17.1.1
Gene ID: HRGMv2_3879_7_29
Type: CAZyme
Location: 40871 - 43549 (+)
Gene ID: HRGMv2_3879_7_30
Type: CAZyme
Location: 43730 - 45673 (-)
Gene ID: HRGMv2_3879_7_31
Type: pfam
Location: 45712 - 46635 (-)
Gene ID: HRGMv2_3879_7_32
Type: pfam
Location: 46672 - 48390 (-)
Gene ID: HRGMv2_3879_7_33
Type: TC
Location: 48422 - 51448 (-)
Gene ID: HRGMv2_3879_7_34
Type: pfam
Location: 51490 - 53415 (-)
Gene ID: HRGMv2_3879_7_35
Type: TC
Location: 53442 - 56597 (-)
Gene ID: HRGMv2_3879_7_36
Type: TC
Location: 57110 - 57694 (+)
Gene ID: HRGMv2_3879_7_37
Type: TC
Location: 57694 - 58224 (+)
Gene ID: HRGMv2_3879_7_38
Type: pfam
Location: 58231 - 59493 (+)
Gene ID: HRGMv2_3879_7_39
Type: TC
Location: 59579 - 61369 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Muribaculum
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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