Genome Details
Selected Rep_genome_ID: HRGMv2_3875
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3875 | 2,353,507 | 97.98% | 0.88% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3875_CGC25 | CGCFAM_00001 | Yes | 10 | 4 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_3875_CGC14 | CGCFAM_00003 | Yes | 6 | 2 | |
| HRGMv2_3875_CGC26 | CGCFAM_00071 | Yes | 5 | 2 | |
| HRGMv2_3875_CGC11 | CGCFAM_00165 | Yes | 9 | 1 | |
| HRGMv2_3875_CGC21 | CGCFAM_00175 | Yes | 6 | 3 | alpha-glucan |
| HRGMv2_3875_CGC13 | CGCFAM_00714 | Yes | 6 | 1 | |
| HRGMv2_3875_CGC28 | CGCFAM_00742 | Yes | 5 | 2 | |
| HRGMv2_3875_CGC4 | CGCFAM_00896 | Yes | 6 | 3 | |
| HRGMv2_3875_CGC1 | CGCFAM_01330 | Yes | 10 | 3 | |
| HRGMv2_3875_CGC18 | CGCFAM_01787 | Yes | 6 | 1 | |
| HRGMv2_3875_CGC20 | CGCFAM_02209 | Yes | 8 | 1 | |
| HRGMv2_3875_CGC22 | CGCFAM_02220 | Yes | 3 | 1 | |
| HRGMv2_3875_CGC3 | CGCFAM_02234 | Yes | 5 | 1 | |
| HRGMv2_3875_CGC7 | CGCFAM_03727 | Yes | 6 | 2 | |
| HRGMv2_3875_CGC16 | CGCFAM_10482 | Yes | 3 | 1 |
Top CAZyme Families