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Cluster: HRGMv2_3875_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3875_9 HRGMv2_3875_9_18 22754 23581 - GT5
pfam HRGMv2_3875_9 HRGMv2_3875_9_19 23715 24731 + Pantoate_ligase
pfam HRGMv2_3875_9 HRGMv2_3875_9_20 24769 25119 + Asp_decarbox
TC HRGMv2_3875_9 HRGMv2_3875_9_21 25174 26520 + 3.A.5.1.1
TC HRGMv2_3875_9 HRGMv2_3875_9_22 26590 28194 + 3.A.1.121.4
pfam HRGMv2_3875_9 HRGMv2_3875_9_23 28234 28527 + Dabb
TC HRGMv2_3875_9 HRGMv2_3875_9_24 28618 30435 - 3.A.1.120.6
TC HRGMv2_3875_9 HRGMv2_3875_9_25 30440 31594 - 3.D.4.3.2
TC HRGMv2_3875_9 HRGMv2_3875_9_26 31607 33199 - 3.D.4.3.2
Gene ID: HRGMv2_3875_9_18
Type: CAZyme
Location: 22754 - 23581 (-)
Gene ID: HRGMv2_3875_9_19
Type: pfam
Location: 23715 - 24731 (+)
Gene ID: HRGMv2_3875_9_20
Type: pfam
Location: 24769 - 25119 (+)
Gene ID: HRGMv2_3875_9_21
Type: TC
Location: 25174 - 26520 (+)
Gene ID: HRGMv2_3875_9_22
Type: TC
Location: 26590 - 28194 (+)
Gene ID: HRGMv2_3875_9_23
Type: pfam
Location: 28234 - 28527 (+)
Gene ID: HRGMv2_3875_9_24
Type: TC
Location: 28618 - 30435 (-)
Gene ID: HRGMv2_3875_9_25
Type: TC
Location: 30440 - 31594 (-)
Gene ID: HRGMv2_3875_9_26
Type: TC
Location: 31607 - 33199 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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