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Cluster: HRGMv2_3875_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3875_22 HRGMv2_3875_22_12 11764 12792 + 3.D.10.1.5
TC HRGMv2_3875_22 HRGMv2_3875_22_13 12831 14828 + 3.D.10.1.5
TC HRGMv2_3875_22 HRGMv2_3875_22_14 14841 15599 + 3.D.10.1.5
pfam HRGMv2_3875_22 HRGMv2_3875_22_15 15708 17726 - Big_5
NULL(UNKNOWN) HRGMv2_3875_22 HRGMv2_3875_22_16 17827 17937 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3875_22 HRGMv2_3875_22_17 17955 20921 + 2.A.6.4.3
NULL(UNKNOWN) HRGMv2_3875_22 HRGMv2_3875_22_18 21205 22614 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3875_22 HRGMv2_3875_22_19 22713 23843 + GT19
Gene ID: HRGMv2_3875_22_12
Type: TC
Location: 11764 - 12792 (+)
Gene ID: HRGMv2_3875_22_13
Type: TC
Location: 12831 - 14828 (+)
Gene ID: HRGMv2_3875_22_14
Type: TC
Location: 14841 - 15599 (+)
Gene ID: HRGMv2_3875_22_15
Type: pfam
Location: 15708 - 17726 (-)
Gene ID: HRGMv2_3875_22_16
Type:
Location: 17827 - 17937 (+)
Gene ID: HRGMv2_3875_22_17
Type: TC
Location: 17955 - 20921 (+)
Gene ID: HRGMv2_3875_22_18
Type:
Location: 21205 - 22614 (-)
Gene ID: HRGMv2_3875_22_19
Type: CAZyme
Location: 22713 - 23843 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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