Cluster: HRGMv2_3875_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3875
- CGC Family ID: CGCFAM_00003
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3875_13 | HRGMv2_3875_13_30 | 32042 | 34426 | + | 8.A.3.1.2 |
| pfam | HRGMv2_3875_13 | HRGMv2_3875_13_31 | 34505 | 35641 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | KR | GDP_Man_Dehyd | GDP_Man_Dehyd |
| pfam | HRGMv2_3875_13 | HRGMv2_3875_13_32 | 35816 | 36721 | - | NTP_transferase | NTP_transf_3 |
| CAZyme | HRGMv2_3875_13 | HRGMv2_3875_13_33 | 36734 | 37564 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3875_13 | HRGMv2_3875_13_34 | 37669 | 37881 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3875_13 | HRGMv2_3875_13_35 | 37896 | 38819 | - | GT2 |
Gene ID: HRGMv2_3875_13_30
Type: TC
Location: 32042 - 34426 (+)
Type: TC
Location: 32042 - 34426 (+)
Gene ID: HRGMv2_3875_13_31
Type: pfam
Location: 34505 - 35641 (-)
Type: pfam
Location: 34505 - 35641 (-)
Gene ID: HRGMv2_3875_13_32
Type: pfam
Location: 35816 - 36721 (-)
Type: pfam
Location: 35816 - 36721 (-)
Gene ID: HRGMv2_3875_13_33
Type: CAZyme
Location: 36734 - 37564 (-)
Type: CAZyme
Location: 36734 - 37564 (-)
Gene ID: HRGMv2_3875_13_34
Type:
Location: 37669 - 37881 (-)
Type:
Location: 37669 - 37881 (-)
Gene ID: HRGMv2_3875_13_35
Type: CAZyme
Location: 37896 - 38819 (-)
Type: CAZyme
Location: 37896 - 38819 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.