Genome Details
Selected Rep_genome_ID: HRGMv2_3200
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3200 | 2,439,041 | 98.63% | 0% | Malaysia | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3200_CGC6 | CGCFAM_00004 | Yes | 5 | 2 | alpha-glucan |
| HRGMv2_3200_CGC11 | CGCFAM_00251 | Yes | 4 | 1 | |
| HRGMv2_3200_CGC20 | CGCFAM_00532 | Yes | 3 | 1 | |
| HRGMv2_3200_CGC9 | CGCFAM_00532 | Yes | 4 | 1 | |
| HRGMv2_3200_CGC25 | CGCFAM_00605 | Yes | 3 | 1 | |
| HRGMv2_3200_CGC7 | CGCFAM_02245 | Yes | 3 | 1 | |
| HRGMv2_3200_CGC14 | CGCFAM_02263 | Yes | 3 | 1 | |
| HRGMv2_3200_CGC3 | CGCFAM_04085 | Yes | 5 | 1 | |
| HRGMv2_3200_CGC10 | CGCFAM_07531 | Yes | 4 | 2 |
Top CAZyme Families