Cluster: HRGMv2_3200_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- CGC Family ID: CGCFAM_00532
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3200_5 | HRGMv2_3200_5_56 | 64148 | 64900 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3200_5 | HRGMv2_3200_5_57 | 64954 | 66765 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3200_5 | HRGMv2_3200_5_58 | 66852 | 68186 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | HRGMv2_3200_5 | HRGMv2_3200_5_59 | 68170 | 69129 | - | 3.A.1.124.3 |
Gene ID: HRGMv2_3200_5_56
Type: CAZyme
Location: 64148 - 64900 (+)
Type: CAZyme
Location: 64148 - 64900 (+)
Gene ID: HRGMv2_3200_5_57
Type:
Location: 64954 - 66765 (+)
Type:
Location: 64954 - 66765 (+)
Gene ID: HRGMv2_3200_5_58
Type: pfam
Location: 66852 - 68186 (-)
Type: pfam
Location: 66852 - 68186 (-)
Gene ID: HRGMv2_3200_5_59
Type: TC
Location: 68170 - 69129 (-)
Type: TC
Location: 68170 - 69129 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.