PROTEIN: HRGMv2_3200_5_57
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Protein File & Metadata
Source:
HRGMv2_3200_5_57.pdb
Genome ID:
Protein ID:
HRGMv2_3200_5_57
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Protein Sequence
MKVNNPKTKK IYTIFFVVIL IMQLTYITYN FVVNKTAYHE DEFFSYGLAN SSNDTFLYGS 60 KLQTPDRYNV WMKGDNFKYY IRTNDDTKFS YATVWENQSK DTIPPLYYTI IHTISSIFAN 120 KFSWYWAYIV NIICVIISQL FVYKIFSAHS KSNLLGLIVC SFWMLTLTGQ NTAYFLRMYA 180 MLTMFGVIYV YQSQKILMQQ DDLKKHDYII LSVIAFLGAL THHFFLVFAF FFTLCQCIAL 240 LIKKRFKDFF LYGISATIGI GLSFAAFPAT FKHLFGKSLN WSGEIDPHIQ FYLLLQNILH 300 GITGFKTSIY MFIYKMSYFS YVIAGLVILL MIVLPLCFLV RNEKWFIKIA NNGKIKIKKA 360 LIDLKKYDYT ILSSVLSSLF LIIVASKIIY YYDVGEYVDR YFFVTTPFFC GAIISLFFAI 420 LSHIPKTTIK KTCILLLCTI LAVDLIYQNV NETPRYILKN NNDNGKVCSY VKNNDCIVLL 480 SSSIFLPCYC QMLENANDIF ITLHTSNEFK KQENEYKKVF NGQREVYLLF DTNNIVTNDS 540 EPVDISELIG NSDEDTSKKK QQLKDTDIVK YFEKISGYKA EYCTKEQTHF CTAQLYKFTN 600 PVK 603
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZP99-F1-model_v4 | 1 | 602 | 4 | 511 | 0.711 |
0.7897 |
| AF-Q9CC27-F1-model_v4 | 1 | 600 | 18 | 527 | 0.6803 |
0.761 |
| AF-Q9HUZ2-F1-model_v4 | 8 | 603 | 3 | 478 | 0.6683 |
0.7614 |
| AF-O06152-F1-model_v4 | 5 | 600 | 50 | 556 | 0.6624 |
0.7624 |
| AF-G5EDN2-F1-model_v4 | 10 | 601 | 1 | 496 | 0.6602 |
0.737 |
| AF-Q656F1-F1-model_v4 | 4 | 603 | 29 | 553 | 0.6399 |
0.7143 |
| AF-Q86VD9-F1-model_v4 | 11 | 601 | 29 | 579 | 0.6342 |
0.6924 |
| AF-Q09837-F1-model_v4 | 8 | 603 | 1 | 520 | 0.6328 |
0.7013 |
| AF-C1GUK5-F1-model_v4 | 3 | 603 | 23 | 597 | 0.6304 |
0.6739 |
| AF-C0NL52-F1-model_v4 | 3 | 603 | 25 | 601 | 0.6273 |
0.6705 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCJ40713.1 | GT83 | 1 | 601 | 9 | 504 | 0.6955 |
0.7813 |
| A0A1I5G8X5 | GT83 | 3 | 603 | 16 | 517 | 0.6945 |
0.7849 |
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 4 | 600 | 1 | 477 | 0.6907 |
0.7836 |
| AF-A0A810N9L6-F1-model_v4 | GT83 | 1 | 601 | 8 | 488 | 0.6906 |
0.7861 |
| AF-Q1IJH5-F1-model_v4 | GT83 | 1 | 600 | 7 | 483 | 0.6904 |
0.7876 |
| AF-A0A7L5ALX8-F1-model_v4 | GT83 | 5 | 600 | 19 | 507 | 0.6873 |
0.7847 |
| A0A6G9CLF0 | GT83 | 13 | 603 | 1 | 509 | 0.6865 |
0.7567 |
| AF-A0A6G9CLF0-F1-model_v4 | GT83 | 13 | 603 | 1 | 509 | 0.6865 |
0.7567 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 9 | 601 | 1 | 473 | 0.6862 |
0.7815 |
| AF-A0A2Z5YEL7-F1-model_v4 | GT83 | 1 | 600 | 15 | 522 | 0.6861 |
0.7665 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0F0L4U4 | GT83 | 1 | 600 | 1 | 490 | 0.7073 |
0.7923 |
| UVT23191.1 | GT83 | 3 | 600 | 1 | 475 | 0.7072 |
0.8015 |
| A0A9E8QA45 | GT83 | 1 | 602 | 5 | 505 | 0.7059 |
0.7862 |
| UCR88156.1 | GT83 | 4 | 602 | 6 | 500 | 0.7034 |
0.7893 |
| I4BYW5 | GT83 | 3 | 603 | 1 | 495 | 0.7027 |
0.785 |
| A0A1C4V164 | GT83 | 2 | 603 | 26 | 511 | 0.7021 |
0.809 |
| A0A1B1BQ47 | GT83 | 1 | 603 | 8 | 512 | 0.701 |
0.7815 |
| A0A2A3FP51 | GT83 | 1 | 600 | 4 | 507 | 0.6994 |
0.7765 |
| A0A2X4U042 | GT83 | 6 | 603 | 1 | 508 | 0.6978 |
0.7698 |
| BCJ40713.1 | GT83 | 1 | 601 | 9 | 504 | 0.6955 |
0.7813 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8age-assembly1.cif.gz_A | 1 | 598 | 1 | 608 | 0.5958 |
0.6358 |
| 6ftg-assembly1.cif.gz_5 | 3 | 598 | 10 | 642 | 0.5922 |
0.634 |
| 7oci-assembly1.cif.gz_F | 1 | 598 | 1 | 603 | 0.5897 |
0.6275 |
| 8agb-assembly1.cif.gz_A | 2 | 599 | 1 | 607 | 0.5893 |
0.6276 |
| 6ezn-assembly1.cif.gz_F | 1 | 599 | 1 | 615 | 0.5877 |
0.628 |
| 8b6l-assembly1.cif.gz_I | 3 | 598 | 1 | 674 | 0.586 |
0.6433 |
| 6c26-assembly1.cif.gz_A | 2 | 600 | 2 | 614 | 0.5858 |
0.6258 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O67601-F1-model_v4 | 9 | 599 | 1 | 416 | 0.6507 |
0.7805 |
| AF-Q6FMA9-F1-model_v4 | 12 | 600 | 1 | 496 | 0.6464 |
0.7221 |
| AF-Q6BH65-F1-model_v4 | 1 | 599 | 20 | 549 | 0.6417 |
0.7087 |
| AF-Q6CU99-F1-model_v4 | 15 | 601 | 2 | 504 | 0.6393 |
0.7115 |
| AF-Q86VD9-F1-model_v4 | 11 | 601 | 29 | 579 | 0.6342 |
0.6924 |
| AF-Q09837-F1-model_v4 | 8 | 603 | 1 | 520 | 0.6328 |
0.7013 |
| AF-Q4I785-F1-model_v4 | 15 | 601 | 1 | 515 | 0.6247 |
0.6895 |
| AF-B4EUL1-F1-model_v4 | 8 | 599 | 3 | 548 | 0.6232 |
0.6707 |
| AF-Q5A0L9-F1-model_v4 | 15 | 599 | 7 | 498 | 0.622 |
0.7016 |
| AF-Q1MLH5-F1-model_v4 | 11 | 598 | 1 | 465 | 0.6218 |
0.7197 |