Cluster: HRGMv2_3200_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- CGC Family ID: CGCFAM_00605
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3200_31 | HRGMv2_3200_31_6 | 4104 | 5462 | - | GH1 |
| TC | HRGMv2_3200_31 | HRGMv2_3200_31_7 | 5777 | 7654 | - | 3.A.1.135.5 |
| TC | HRGMv2_3200_31 | HRGMv2_3200_31_8 | 7673 | 9427 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_3200_31_6
Type: CAZyme
Location: 4104 - 5462 (-)
Type: CAZyme
Location: 4104 - 5462 (-)
Gene ID: HRGMv2_3200_31_7
Type: TC
Location: 5777 - 7654 (-)
Type: TC
Location: 5777 - 7654 (-)
Gene ID: HRGMv2_3200_31_8
Type: TC
Location: 7673 - 9427 (-)
Type: TC
Location: 7673 - 9427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.