Cluster: HRGMv2_3200_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3200
- CGC Family ID: CGCFAM_07531
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3200_5 | HRGMv2_3200_5_66 | 74212 | 75126 | - | 3.A.1.131.1 |
| TF | HRGMv2_3200_5 | HRGMv2_3200_5_67 | 75240 | 75914 | - | Trans_reg_C |
| CAZyme | HRGMv2_3200_5 | HRGMv2_3200_5_68 | 76056 | 77723 | - | CBM35 | GH26 |
| CAZyme | HRGMv2_3200_5 | HRGMv2_3200_5_69 | 77993 | 78838 | - | GT2 |
Gene ID: HRGMv2_3200_5_66
Type: TC
Location: 74212 - 75126 (-)
Type: TC
Location: 74212 - 75126 (-)
Gene ID: HRGMv2_3200_5_67
Type: TF
Location: 75240 - 75914 (-)
Type: TF
Location: 75240 - 75914 (-)
Gene ID: HRGMv2_3200_5_68
Type: CAZyme
Location: 76056 - 77723 (-)
Type: CAZyme
Location: 76056 - 77723 (-)
Gene ID: HRGMv2_3200_5_69
Type: CAZyme
Location: 77993 - 78838 (-)
Type: CAZyme
Location: 77993 - 78838 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.