Cluster: HRGMv2_3200_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- CGC Family ID: CGCFAM_00251
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3200_6 | HRGMv2_3200_6_22 | 20032 | 21297 | - | GT4 |
| STP | HRGMv2_3200_6 | HRGMv2_3200_6_23 | 21834 | 23513 | - | Fer4 |
| TC | HRGMv2_3200_6 | HRGMv2_3200_6_24 | 23520 | 25412 | - | 3.D.1.5.1 |
| TC | HRGMv2_3200_6 | HRGMv2_3200_6_25 | 25413 | 25883 | - | 3.D.1.5.1 |
Gene ID: HRGMv2_3200_6_22
Type: CAZyme
Location: 20032 - 21297 (-)
Type: CAZyme
Location: 20032 - 21297 (-)
Gene ID: HRGMv2_3200_6_23
Type: STP
Location: 21834 - 23513 (-)
Type: STP
Location: 21834 - 23513 (-)
Gene ID: HRGMv2_3200_6_24
Type: TC
Location: 23520 - 25412 (-)
Type: TC
Location: 23520 - 25412 (-)
Gene ID: HRGMv2_3200_6_25
Type: TC
Location: 25413 - 25883 (-)
Type: TC
Location: 25413 - 25883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.