Cluster: HRGMv2_3200_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3200
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3200_4 | HRGMv2_3200_4_32 | 31598 | 32896 | - | 2.A.86.1.8 |
| CAZyme | HRGMv2_3200_4 | HRGMv2_3200_4_33 | 33137 | 34549 | - | GT5 |
| pfam | HRGMv2_3200_4 | HRGMv2_3200_4_34 | 34588 | 35715 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3200_4 | HRGMv2_3200_4_35 | 35732 | 36934 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3200_4 | HRGMv2_3200_4_36 | 36982 | 38991 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_3200_4_32
Type: TC
Location: 31598 - 32896 (-)
Type: TC
Location: 31598 - 32896 (-)
Gene ID: HRGMv2_3200_4_33
Type: CAZyme
Location: 33137 - 34549 (-)
Type: CAZyme
Location: 33137 - 34549 (-)
Gene ID: HRGMv2_3200_4_34
Type: pfam
Location: 34588 - 35715 (-)
Type: pfam
Location: 34588 - 35715 (-)
Gene ID: HRGMv2_3200_4_35
Type: pfam
Location: 35732 - 36934 (-)
Type: pfam
Location: 35732 - 36934 (-)
Gene ID: HRGMv2_3200_4_36
Type: CAZyme
Location: 36982 - 38991 (-)
Type: CAZyme
Location: 36982 - 38991 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.