Cluster: HRGMv2_3200_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3200
- CGC Family ID: CGCFAM_02263
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3200_10 | HRGMv2_3200_10_73 | 77330 | 78043 | + | 3.A.1.25.5 |
| pfam | HRGMv2_3200_10 | HRGMv2_3200_10_74 | 78046 | 78963 | + | SUFBD_core |
| CAZyme | HRGMv2_3200_10 | HRGMv2_3200_10_75 | 79043 | 80794 | - | GH26 |
Gene ID: HRGMv2_3200_10_73
Type: TC
Location: 77330 - 78043 (+)
Type: TC
Location: 77330 - 78043 (+)
Gene ID: HRGMv2_3200_10_74
Type: pfam
Location: 78046 - 78963 (+)
Type: pfam
Location: 78046 - 78963 (+)
Gene ID: HRGMv2_3200_10_75
Type: CAZyme
Location: 79043 - 80794 (-)
Type: CAZyme
Location: 79043 - 80794 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.