Genome Details
Selected Rep_genome_ID: HRGMv2_2978
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp900551505
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG154_22 | 2,003,833 | 95.08% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR040521 | 2,025,464 | 95.3% | 0% | China | Asia | CGMR |
| HRGMv2_2978 | 1,972,416 | 96.64% | 0% | Cameroon | Africa | HRGM |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_E_24_1866.6 | 2,095,539 | 93.29% | 0% | NA | Africa | Hadza |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2978_CGC15 | CGCFAM_00003 | Yes | 3 | 1 | |
| HRGMv2_2978_CGC6 | CGCFAM_00004 | Yes | 6 | 2 | alpha-glucan |
| HRGMv2_2978_CGC8 | CGCFAM_00251 | Yes | 4 | 1 | |
| HRGMv2_2978_CGC4 | CGCFAM_00317 | Yes | 7 | 1 | |
| HRGMv2_2978_CGC9 | CGCFAM_00611 | Yes | 5 | 2 | |
| HRGMv2_2978_CGC12 | CGCFAM_10265 | Yes | 3 | 1 |
Top CAZyme Families