Cluster: HRGMv2_2978_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2978
- CGC Family ID: CGCFAM_00003
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2978_186 | HRGMv2_2978_186_1 | 143 | 919 | - | 3.A.1.103.4 |
| pfam | HRGMv2_2978_186 | HRGMv2_2978_186_2 | 1236 | 2174 | - | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd |
| CAZyme | HRGMv2_2978_186 | HRGMv2_2978_186_3 | 2249 | 3370 | - | GT4 |
Gene ID: HRGMv2_2978_186_1
Type: TC
Location: 143 - 919 (-)
Type: TC
Location: 143 - 919 (-)
Gene ID: HRGMv2_2978_186_2
Type: pfam
Location: 1236 - 2174 (-)
Type: pfam
Location: 1236 - 2174 (-)
Gene ID: HRGMv2_2978_186_3
Type: CAZyme
Location: 2249 - 3370 (-)
Type: CAZyme
Location: 2249 - 3370 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp900551505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.