Cluster: HRGMv2_2978_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2978
- CGC Family ID: CGCFAM_00251
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2978_58 | HRGMv2_2978_58_1 | 132 | 671 | + | 3.D.1.5.1 |
| TC | HRGMv2_2978_58 | HRGMv2_2978_58_2 | 674 | 2551 | + | 3.D.1.5.1 |
| STP | HRGMv2_2978_58 | HRGMv2_2978_58_3 | 2556 | 4244 | + | Fer4 |
| CAZyme | HRGMv2_2978_58 | HRGMv2_2978_58_4 | 4302 | 4988 | - | GH25 |
Gene ID: HRGMv2_2978_58_1
Type: TC
Location: 132 - 671 (+)
Type: TC
Location: 132 - 671 (+)
Gene ID: HRGMv2_2978_58_2
Type: TC
Location: 674 - 2551 (+)
Type: TC
Location: 674 - 2551 (+)
Gene ID: HRGMv2_2978_58_3
Type: STP
Location: 2556 - 4244 (+)
Type: STP
Location: 2556 - 4244 (+)
Gene ID: HRGMv2_2978_58_4
Type: CAZyme
Location: 4302 - 4988 (-)
Type: CAZyme
Location: 4302 - 4988 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp900551505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.