Cluster: HRGMv2_2978_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2978
- CGC Family ID: CGCFAM_10265
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2978_93 | HRGMv2_2978_93_4 | 2293 | 3762 | - | 3.D.10.1.6 |
| NULL(UNKNOWN) | HRGMv2_2978_93 | HRGMv2_2978_93_5 | 4031 | 4285 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2978_93 | HRGMv2_2978_93_6 | 4352 | 6271 | - | CBM2 | GH5_1 |
Gene ID: HRGMv2_2978_93_4
Type: TC
Location: 2293 - 3762 (-)
Type: TC
Location: 2293 - 3762 (-)
Gene ID: HRGMv2_2978_93_5
Type:
Location: 4031 - 4285 (+)
Type:
Location: 4031 - 4285 (+)
Gene ID: HRGMv2_2978_93_6
Type: CAZyme
Location: 4352 - 6271 (-)
Type: CAZyme
Location: 4352 - 6271 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp900551505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.