Genome Details
Selected Rep_genome_ID: HRGMv2_2755
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900548625
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG253_bin.49 | 2,283,371 | 96.64% | 1.34% | NA | Africa | H3AfricaPhase2 |
| CGMR025412 | 2,212,414 | 91.93% | 3.26% | China | Asia | CGMR |
| GCA_021622395.1_ASM2162239v1_genomic | 2,093,533 | 97.21% | 1.34% | NA | Africa | H3AfricaPhase1 |
| HRGMv2_2755 | 2,275,777 | 94.63% | 0.671% | Italy | Europe | HRGM |
| MGYG000000741 | 2,390,173 | 95.97% | 1.34% | Kazakhstan | Asia | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2755_CGC5 | CGCFAM_00004 | Yes | 12 | 4 | alpha-glucan |
| HRGMv2_2755_CGC10 | CGCFAM_00087 | Yes | 12 | 1 | |
| HRGMv2_2755_CGC6 | CGCFAM_00305 | Yes | 4 | 1 | |
| HRGMv2_2755_CGC13 | CGCFAM_00368 | Yes | 3 | 1 | |
| HRGMv2_2755_CGC12 | CGCFAM_00409 | Yes | 4 | 1 | |
| HRGMv2_2755_CGC3 | CGCFAM_00532 | Yes | 3 | 1 | |
| HRGMv2_2755_CGC4 | CGCFAM_06940 | Yes | 5 | 1 |
Top CAZyme Families