Cluster: HRGMv2_2755_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2755
- CGC Family ID: CGCFAM_06940
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2755_6 | HRGMv2_2755_6_5 | 4257 | 4928 | + | 3.A.1.125.2 |
| CAZyme | HRGMv2_2755_6 | HRGMv2_2755_6_6 | 5249 | 6961 | - | GH2 |
| TC | HRGMv2_2755_6 | HRGMv2_2755_6_7 | 6958 | 8244 | - | 2.A.1.84.3 |
| pfam | HRGMv2_2755_6 | HRGMv2_2755_6_8 | 8308 | 9228 | - | DNA_processg_A |
| TC | HRGMv2_2755_6 | HRGMv2_2755_6_9 | 9225 | 10415 | - | 3.A.18.1.1 |
Gene ID: HRGMv2_2755_6_5
Type: TC
Location: 4257 - 4928 (+)
Type: TC
Location: 4257 - 4928 (+)
Gene ID: HRGMv2_2755_6_6
Type: CAZyme
Location: 5249 - 6961 (-)
Type: CAZyme
Location: 5249 - 6961 (-)
Gene ID: HRGMv2_2755_6_7
Type: TC
Location: 6958 - 8244 (-)
Type: TC
Location: 6958 - 8244 (-)
Gene ID: HRGMv2_2755_6_8
Type: pfam
Location: 8308 - 9228 (-)
Type: pfam
Location: 8308 - 9228 (-)
Gene ID: HRGMv2_2755_6_9
Type: TC
Location: 9225 - 10415 (-)
Type: TC
Location: 9225 - 10415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900548625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2755_6_7 | vegetarian > vegan | 1.05851 | 0.00065 |