Cluster: HRGMv2_2755_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2755
- CGC Family ID: CGCFAM_00305
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2755_11 | HRGMv2_2755_11_16 | 14898 | 15125 | + | 9.A.8.1.6 |
| TC | HRGMv2_2755_11 | HRGMv2_2755_11_17 | 15122 | 17107 | + | 9.A.8.1.6 |
| NULL(UNKNOWN) | HRGMv2_2755_11 | HRGMv2_2755_11_18 | 17127 | 17267 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2755_11 | HRGMv2_2755_11_19 | 17349 | 18149 | + | CE4 |
Gene ID: HRGMv2_2755_11_16
Type: TC
Location: 14898 - 15125 (+)
Type: TC
Location: 14898 - 15125 (+)
Gene ID: HRGMv2_2755_11_17
Type: TC
Location: 15122 - 17107 (+)
Type: TC
Location: 15122 - 17107 (+)
Gene ID: HRGMv2_2755_11_18
Type:
Location: 17127 - 17267 (+)
Type:
Location: 17127 - 17267 (+)
Gene ID: HRGMv2_2755_11_19
Type: CAZyme
Location: 17349 - 18149 (+)
Type: CAZyme
Location: 17349 - 18149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900548625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2755_11_19 | vegetarian > vegan | 1.00424 | 0.00065 |