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Cluster: HRGMv2_2755_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2755_17 HRGMv2_2755_17_1 152 829 + 3.A.1.8.2
TC HRGMv2_2755_17 HRGMv2_2755_17_2 829 1854 + 3.A.1.6.8
pfam HRGMv2_2755_17 HRGMv2_2755_17_3 1928 2608 + YhhN
pfam HRGMv2_2755_17 HRGMv2_2755_17_4 2801 3472 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_2755_17 HRGMv2_2755_17_5 3609 5924 - 3.A.9.1.2
pfam HRGMv2_2755_17 HRGMv2_2755_17_6 6029 7183 - DUF5711
pfam HRGMv2_2755_17 HRGMv2_2755_17_7 7173 7937 - PseudoU_synth_1 | PseudoU_synth_1
TC HRGMv2_2755_17 HRGMv2_2755_17_8 7959 8762 - 3.A.1.26.7
TC HRGMv2_2755_17 HRGMv2_2755_17_9 8755 9624 - 3.A.1.26.9
TC HRGMv2_2755_17 HRGMv2_2755_17_10 9645 10502 - 3.A.1.26.7
pfam HRGMv2_2755_17 HRGMv2_2755_17_11 10523 11386 - Cons_hypoth95 | Methyltransf_15 | Methyltrans_SAM
CAZyme HRGMv2_2755_17 HRGMv2_2755_17_12 11418 13916 - GT51
Gene ID: HRGMv2_2755_17_1
Type: TC
Location: 152 - 829 (+)
Gene ID: HRGMv2_2755_17_2
Type: TC
Location: 829 - 1854 (+)
Gene ID: HRGMv2_2755_17_3
Type: pfam
Location: 1928 - 2608 (+)
Gene ID: HRGMv2_2755_17_4
Type: pfam
Location: 2801 - 3472 (+)
Gene ID: HRGMv2_2755_17_5
Type: TC
Location: 3609 - 5924 (-)
Gene ID: HRGMv2_2755_17_6
Type: pfam
Location: 6029 - 7183 (-)
Gene ID: HRGMv2_2755_17_7
Type: pfam
Location: 7173 - 7937 (-)
Gene ID: HRGMv2_2755_17_8
Type: TC
Location: 7959 - 8762 (-)
Gene ID: HRGMv2_2755_17_9
Type: TC
Location: 8755 - 9624 (-)
Gene ID: HRGMv2_2755_17_10
Type: TC
Location: 9645 - 10502 (-)
Gene ID: HRGMv2_2755_17_11
Type: pfam
Location: 10523 - 11386 (-)
Gene ID: HRGMv2_2755_17_12
Type: CAZyme
Location: 11418 - 13916 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2755_17_2 vegetarian > vegan 1.04151 0.00065

🧭 Explore Read Mapping of CGC

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