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Genome Details

Selected Rep_genome_ID: HRGMv2_2618
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR056575 2,323,063 95.42% 0.67% China Asia CGMR
DM126_31 2,631,464 97.46% 0.67% NA Africa H3AfricaPhase2
HRGMv2_2618 2,589,536 97.76% 0.671% Cameroon Africa HRGM
MGYG000000706 2,490,616 94.41% 0.67% Kazakhstan Asia UHGG
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-I-L_E_21_2379.123 2,528,696 97.76% 0.67% NA Africa Hadza
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2618_CGC22 CGCFAM_00004 Yes 8 3 alpha-glucan
HRGMv2_2618_CGC16 CGCFAM_00005 Yes 9 4
HRGMv2_2618_CGC28 CGCFAM_00021 Yes 4 1
HRGMv2_2618_CGC6 CGCFAM_00051 Yes 3 1
HRGMv2_2618_CGC14 CGCFAM_00058 Yes 7 2
HRGMv2_2618_CGC7 CGCFAM_00058 Yes 4 1
HRGMv2_2618_CGC20 CGCFAM_00167 Yes 9 3
HRGMv2_2618_CGC11 CGCFAM_00619 Yes 5 1
HRGMv2_2618_CGC33 CGCFAM_00854 Yes 3 1
HRGMv2_2618_CGC27 CGCFAM_01329 Yes 3 1
HRGMv2_2618_CGC3 CGCFAM_01765 Yes 3 1
HRGMv2_2618_CGC13 CGCFAM_02663 Yes 11 3
HRGMv2_2618_CGC10 CGCFAM_02752 Yes 6 2
HRGMv2_2618_CGC12 CGCFAM_03085 Yes 9 1
HRGMv2_2618_CGC30 CGCFAM_03456 Yes 5 1
HRGMv2_2618_CGC24 CGCFAM_05073 Yes 5 3
HRGMv2_2618_CGC26 CGCFAM_07125 Yes 12 2
Top CAZyme Families