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Cluster: HRGMv2_2618_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2618_24 HRGMv2_2618_24_7 13031 14464 - GT5
pfam HRGMv2_2618_24 HRGMv2_2618_24_8 14495 15631 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_2618_24 HRGMv2_2618_24_9 15621 16868 - NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme HRGMv2_2618_24 HRGMv2_2618_24_10 16932 18875 - CBM48 | GH13_9
CAZyme HRGMv2_2618_24 HRGMv2_2618_24_11 19580 22030 + GT35
TC HRGMv2_2618_24 HRGMv2_2618_24_12 22111 22935 + 3.A.1.3.10
TC HRGMv2_2618_24 HRGMv2_2618_24_13 22968 23663 + 3.A.1.3.14
TC HRGMv2_2618_24 HRGMv2_2618_24_14 23678 24463 + 3.A.1.3.24
Gene ID: HRGMv2_2618_24_7
Type: CAZyme
Location: 13031 - 14464 (-)
Gene ID: HRGMv2_2618_24_8
Type: pfam
Location: 14495 - 15631 (-)
Gene ID: HRGMv2_2618_24_9
Type: pfam
Location: 15621 - 16868 (-)
Gene ID: HRGMv2_2618_24_10
Type: CAZyme
Location: 16932 - 18875 (-)
Gene ID: HRGMv2_2618_24_11
Type: CAZyme
Location: 19580 - 22030 (+)
Gene ID: HRGMv2_2618_24_12
Type: TC
Location: 22111 - 22935 (+)
Gene ID: HRGMv2_2618_24_13
Type: TC
Location: 22968 - 23663 (+)
Gene ID: HRGMv2_2618_24_14
Type: TC
Location: 23678 - 24463 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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