Genome Details
Selected Rep_genome_ID: HRGMv2_2520
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2520 | 1,891,181 | 93.74% | 0% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2520_CGC20 | CGCFAM_00003 | Yes | 18 | 6 | |
| HRGMv2_2520_CGC24 | CGCFAM_00099 | Yes | 4 | 1 | |
| HRGMv2_2520_CGC17 | CGCFAM_00102 | Yes | 6 | 1 | |
| HRGMv2_2520_CGC13 | CGCFAM_00311 | Yes | 16 | 4 | host glycan |
| HRGMv2_2520_CGC27 | CGCFAM_00638 | Yes | 4 | 1 | |
| HRGMv2_2520_CGC1 | CGCFAM_00718 | Yes | 13 | 2 | |
| HRGMv2_2520_CGC4 | CGCFAM_01997 | Yes | 4 | 1 | |
| HRGMv2_2520_CGC19 | CGCFAM_02168 | Yes | 5 | 2 | |
| HRGMv2_2520_CGC23 | CGCFAM_05162 | Yes | 8 | 1 | |
| HRGMv2_2520_CGC9 | CGCFAM_09213 | Yes | 3 | 1 |
Top CAZyme Families