Cluster: HRGMv2_2520_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2520
- CGC Family ID: CGCFAM_00102
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2520_11 | HRGMv2_2520_11_7 | 3463 | 4674 | + | 3.A.5.10.1 |
| TC | HRGMv2_2520_11 | HRGMv2_2520_11_8 | 4683 | 6260 | + | 3.A.5.10.1 |
| TC | HRGMv2_2520_11 | HRGMv2_2520_11_9 | 6262 | 7806 | + | 3.A.5.10.1 |
| TC | HRGMv2_2520_11 | HRGMv2_2520_11_10 | 8046 | 8258 | + | 3.A.5.10.1 |
| TC | HRGMv2_2520_11 | HRGMv2_2520_11_11 | 8304 | 10679 | + | 3.A.5.10.1 |
| CAZyme | HRGMv2_2520_11 | HRGMv2_2520_11_12 | 10690 | 12195 | + | GT4 |
Gene ID: HRGMv2_2520_11_7
Type: TC
Location: 3463 - 4674 (+)
Type: TC
Location: 3463 - 4674 (+)
Gene ID: HRGMv2_2520_11_8
Type: TC
Location: 4683 - 6260 (+)
Type: TC
Location: 4683 - 6260 (+)
Gene ID: HRGMv2_2520_11_9
Type: TC
Location: 6262 - 7806 (+)
Type: TC
Location: 6262 - 7806 (+)
Gene ID: HRGMv2_2520_11_10
Type: TC
Location: 8046 - 8258 (+)
Type: TC
Location: 8046 - 8258 (+)
Gene ID: HRGMv2_2520_11_11
Type: TC
Location: 8304 - 10679 (+)
Type: TC
Location: 8304 - 10679 (+)
Gene ID: HRGMv2_2520_11_12
Type: CAZyme
Location: 10690 - 12195 (+)
Type: CAZyme
Location: 10690 - 12195 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.