Genome Details
Selected Rep_genome_ID: HRGMv2_2500
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2500 | 1,953,745 | 99.86% | 0.398% | UK | Europe | HRGM |
| MGYG000003146 | 1,940,370 | 99.47% | 0.4% | United States | North America | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2500_CGC7 | CGCFAM_00311 | Yes | 11 | 5 | host glycan |
| HRGMv2_2500_CGC3 | CGCFAM_00402 | Yes | 20 | 5 | |
| HRGMv2_2500_CGC11 | CGCFAM_01064 | Yes | 14 | 3 | |
| HRGMv2_2500_CGC4 | CGCFAM_01444 | Yes | 5 | 1 | |
| HRGMv2_2500_CGC13 | CGCFAM_01737 | Yes | 7 | 1 | |
| HRGMv2_2500_CGC19 | CGCFAM_04057 | Yes | 8 | 1 |
Top CAZyme Families