Cluster: HRGMv2_2500_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2500
- CGC Family ID: CGCFAM_01737
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2500_7 | HRGMv2_2500_7_1 | 87 | 992 | - | 2.A.7.3.31 |
| peptidase | HRGMv2_2500_7 | HRGMv2_2500_7_2 | 1001 | 1936 | - | S12.UPW |
| pfam | HRGMv2_2500_7 | HRGMv2_2500_7_3 | 1933 | 2658 | - | CppA_N | CppA_C |
| TC | HRGMv2_2500_7 | HRGMv2_2500_7_4 | 2768 | 3673 | - | 1.A.8.2.2 |
| pfam | HRGMv2_2500_7 | HRGMv2_2500_7_5 | 3831 | 4997 | - | CPSase_L_D2 | ATP-grasp_4 |
| peptidase | HRGMv2_2500_7 | HRGMv2_2500_7_6 | 5010 | 5750 | - | S09.UPW |
| CAZyme | HRGMv2_2500_7 | HRGMv2_2500_7_7 | 5771 | 6595 | - | CE1 |
Gene ID: HRGMv2_2500_7_1
Type: TC
Location: 87 - 992 (-)
Type: TC
Location: 87 - 992 (-)
Gene ID: HRGMv2_2500_7_2
Type: peptidase
Location: 1001 - 1936 (-)
Type: peptidase
Location: 1001 - 1936 (-)
Gene ID: HRGMv2_2500_7_3
Type: pfam
Location: 1933 - 2658 (-)
Type: pfam
Location: 1933 - 2658 (-)
Gene ID: HRGMv2_2500_7_4
Type: TC
Location: 2768 - 3673 (-)
Type: TC
Location: 2768 - 3673 (-)
Gene ID: HRGMv2_2500_7_5
Type: pfam
Location: 3831 - 4997 (-)
Type: pfam
Location: 3831 - 4997 (-)
Gene ID: HRGMv2_2500_7_6
Type: peptidase
Location: 5010 - 5750 (-)
Type: peptidase
Location: 5010 - 5750 (-)
Gene ID: HRGMv2_2500_7_7
Type: CAZyme
Location: 5771 - 6595 (-)
Type: CAZyme
Location: 5771 - 6595 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.