Genome Details
Selected Rep_genome_ID: HRGMv2_2456
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus salivarius
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG078_12 | 2,152,369 | 99.03% | 0.15% | NA | Africa | H3AfricaPhase2 |
| CGMR071076 | 1,794,912 | 91.95% | 1.76% | China | Asia | CGMR |
| HRGMv2_2456 | 2,088,217 | 99.9% | 0.145% | UK | Europe | HRGM |
| Rep_1120 | 2,167,967 | 95.2412% | 0.473071% | NA | NA | WIS |
| SPMP106_bin.113 | 2,155,561 | 94.42% | 3.48% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2456_CGC11 | CGCFAM_00003 | Yes | 17 | 9 | |
| HRGMv2_2456_CGC18 | CGCFAM_00004 | Yes | 7 | 4 | alpha-glucan |
| HRGMv2_2456_CGC19 | CGCFAM_00102 | Yes | 7 | 2 | |
| HRGMv2_2456_CGC6 | CGCFAM_00130 | Yes | 3 | 1 | |
| HRGMv2_2456_CGC15 | CGCFAM_00598 | Yes | 14 | 5 | |
| HRGMv2_2456_CGC21 | CGCFAM_02048 | Yes | 4 | 1 | |
| HRGMv2_2456_CGC3 | CGCFAM_02157 | Yes | 13 | 3 | |
| HRGMv2_2456_CGC5 | CGCFAM_03353 | Yes | 10 | 2 | |
| HRGMv2_2456_CGC16 | CGCFAM_10093 | Yes | 7 | 1 |
Top CAZyme Families