Genome Details
Selected Rep_genome_ID: HRGMv2_1911
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Absicoccus
Species
Absicoccus porci
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1911 | 1,871,066 | 92.99% | 1.65% | South Korea | Asia | HRGM |
| MGYG000000930 | 1,894,829 | 96.23% | 2.59% | Germany | Europe | UHGG |
| SW088_bin.87 | 1,951,329 | 96.5% | 2.73% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1911_CGC8 | CGCFAM_00005 | Yes | 12 | 7 | |
| HRGMv2_1911_CGC3 | CGCFAM_00010 | Yes | 8 | 2 | alpha-glucan |
| HRGMv2_1911_CGC7 | CGCFAM_00683 | Yes | 3 | 1 | |
| HRGMv2_1911_CGC13 | CGCFAM_01532 | Yes | 7 | 1 | |
| HRGMv2_1911_CGC1 | CGCFAM_01749 | Yes | 5 | 1 | |
| HRGMv2_1911_CGC16 | CGCFAM_02890 | Yes | 6 | 1 |
Top CAZyme Families