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Cluster: HRGMv2_1911_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1911_3 HRGMv2_1911_3_74 67984 69315 + 3.A.1.1.45
TC HRGMv2_1911_3 HRGMv2_1911_3_75 69378 70220 + 3.A.1.1.45
TC HRGMv2_1911_3 HRGMv2_1911_3_76 70222 71055 + 3.A.1.1.45
TF HRGMv2_1911_3 HRGMv2_1911_3_77 71081 72085 + LacI
CAZyme HRGMv2_1911_3 HRGMv2_1911_3_78 72109 73629 + GH77
TC HRGMv2_1911_3 HRGMv2_1911_3_79 73601 74764 + 3.A.1.1.26
TF HRGMv2_1911_3 HRGMv2_1911_3_80 74802 75779 - LacI
CAZyme HRGMv2_1911_3 HRGMv2_1911_3_81 75908 78157 + GT35
Gene ID: HRGMv2_1911_3_74
Type: TC
Location: 67984 - 69315 (+)
Gene ID: HRGMv2_1911_3_75
Type: TC
Location: 69378 - 70220 (+)
Gene ID: HRGMv2_1911_3_76
Type: TC
Location: 70222 - 71055 (+)
Gene ID: HRGMv2_1911_3_77
Type: TF
Location: 71081 - 72085 (+)
Gene ID: HRGMv2_1911_3_78
Type: CAZyme
Location: 72109 - 73629 (+)
Gene ID: HRGMv2_1911_3_79
Type: TC
Location: 73601 - 74764 (+)
Gene ID: HRGMv2_1911_3_80
Type: TF
Location: 74802 - 75779 (-)
Gene ID: HRGMv2_1911_3_81
Type: CAZyme
Location: 75908 - 78157 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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