Cluster: HRGMv2_1911_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1911
- CGC Family ID: CGCFAM_01749
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1911_1 | HRGMv2_1911_1_64 | 63979 | 65202 | + | 2.A.49.9.4 |
| pfam | HRGMv2_1911_1 | HRGMv2_1911_1_65 | 65297 | 66436 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_1911_1 | HRGMv2_1911_1_66 | 66439 | 67548 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_1911_1 | HRGMv2_1911_1_67 | 67548 | 68990 | + | GT5 |
| TC | HRGMv2_1911_1 | HRGMv2_1911_1_68 | 69099 | 69365 | + | 8.A.8.1.3 |
Gene ID: HRGMv2_1911_1_64
Type: TC
Location: 63979 - 65202 (+)
Type: TC
Location: 63979 - 65202 (+)
Gene ID: HRGMv2_1911_1_65
Type: pfam
Location: 65297 - 66436 (+)
Type: pfam
Location: 65297 - 66436 (+)
Gene ID: HRGMv2_1911_1_66
Type: pfam
Location: 66439 - 67548 (+)
Type: pfam
Location: 66439 - 67548 (+)
Gene ID: HRGMv2_1911_1_67
Type: CAZyme
Location: 67548 - 68990 (+)
Type: CAZyme
Location: 67548 - 68990 (+)
Gene ID: HRGMv2_1911_1_68
Type: TC
Location: 69099 - 69365 (+)
Type: TC
Location: 69099 - 69365 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Absicoccus
Species
Absicoccus porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.