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Cluster: HRGMv2_1911_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_19 21073 21765 - GT2
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_20 21811 22782 - GT2
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_21 22754 23641 - GT2
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_22 23643 24872 - GT4
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_23 24866 25633 - GT2
TC HRGMv2_1911_11 HRGMv2_1911_11_24 25633 26991 - 9.B.18.1.3
STP HRGMv2_1911_11 HRGMv2_1911_11_25 27101 28846 - SBP_bac_3
pfam HRGMv2_1911_11 HRGMv2_1911_11_26 29109 30848 - LytR_cpsA_psr
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_27 30918 33389 - GT2 | GT2
TC HRGMv2_1911_11 HRGMv2_1911_11_28 33389 34177 - 3.A.1.103.4
TC HRGMv2_1911_11 HRGMv2_1911_11_29 34185 35318 - 3.A.1.103.4
CAZyme HRGMv2_1911_11 HRGMv2_1911_11_30 35392 37257 - GH25
Gene ID: HRGMv2_1911_11_19
Type: CAZyme
Location: 21073 - 21765 (-)
Gene ID: HRGMv2_1911_11_20
Type: CAZyme
Location: 21811 - 22782 (-)
Gene ID: HRGMv2_1911_11_21
Type: CAZyme
Location: 22754 - 23641 (-)
Gene ID: HRGMv2_1911_11_22
Type: CAZyme
Location: 23643 - 24872 (-)
Gene ID: HRGMv2_1911_11_23
Type: CAZyme
Location: 24866 - 25633 (-)
Gene ID: HRGMv2_1911_11_24
Type: TC
Location: 25633 - 26991 (-)
Gene ID: HRGMv2_1911_11_25
Type: STP
Location: 27101 - 28846 (-)
Gene ID: HRGMv2_1911_11_26
Type: pfam
Location: 29109 - 30848 (-)
Gene ID: HRGMv2_1911_11_27
Type: CAZyme
Location: 30918 - 33389 (-)
Gene ID: HRGMv2_1911_11_28
Type: TC
Location: 33389 - 34177 (-)
Gene ID: HRGMv2_1911_11_29
Type: TC
Location: 34185 - 35318 (-)
Gene ID: HRGMv2_1911_11_30
Type: CAZyme
Location: 35392 - 37257 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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