Cluster: HRGMv2_1911_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1911
- CGC Family ID: CGCFAM_00683
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1911_10 | HRGMv2_1911_10_22 | 20868 | 22628 | + | GH13_9 |
| pfam | HRGMv2_1911_10 | HRGMv2_1911_10_23 | 22630 | 23184 | + | Chromate_transp |
| TC | HRGMv2_1911_10 | HRGMv2_1911_10_24 | 23181 | 23708 | + | 2.A.51.1.6 |
Gene ID: HRGMv2_1911_10_22
Type: CAZyme
Location: 20868 - 22628 (+)
Type: CAZyme
Location: 20868 - 22628 (+)
Gene ID: HRGMv2_1911_10_23
Type: pfam
Location: 22630 - 23184 (+)
Type: pfam
Location: 22630 - 23184 (+)
Gene ID: HRGMv2_1911_10_24
Type: TC
Location: 23181 - 23708 (+)
Type: TC
Location: 23181 - 23708 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Absicoccus
Species
Absicoccus porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.