Genome Details
Selected Rep_genome_ID: HRGMv2_0735
Total Genomes Found: 9
Total Genomes Found: 9
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Limiplasma
Species
Limiplasma sp900548145
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C104.bin_46 | 3,389,339 | 90.73% | 3.49% | China(Inner Mongolia) | Asia | IMGG |
| CGMR097637 | 3,001,507 | 99.19% | 1.88% | China | Asia | CGMR |
| HRGMv2_0735 | 2,938,906 | 94.22% | 0.268% | Cameroon | Africa | HRGM |
| KY187_76 | 3,556,592 | 99.19% | 2.69% | NA | Africa | H3AfricaPhase2 |
| MGYG000004088 | 2,947,168 | 97.71% | 1.88% | United Kingdom | Europe | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-A-D_P_17_1504.72 | 2,785,982 | 97.31% | 1.08% | NA | Africa | Hadza |
| Rep_3025 | 3,317,650 | 98.3871% | 2.68817% | NA | NA | WIS |
| SPMP102_bin.65 | 3,022,957 | 99.19% | 2.69% | Singapore | Asia | SPMP |
| SPMP28_bin.83 | 3,118,585 | 97.98% | 2.71% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0735_CGC32 | CGCFAM_04506 | Yes | 8 | 3 | |
| HRGMv2_0735_CGC52 | CGCFAM_05128 | Yes | 3 | 1 | |
| HRGMv2_0735_CGC8 | CGCFAM_05421 | Yes | 7 | 2 | |
| HRGMv2_0735_CGC42 | CGCFAM_06871 | Yes | 8 | 2 | |
| HRGMv2_0735_CGC38 | CGCFAM_06873 | Yes | 4 | 1 | |
| HRGMv2_0735_CGC20 | CGCFAM_07865 | Yes | 7 | 1 | |
| HRGMv2_0735_CGC22 | CGCFAM_08270 | Yes | 6 | 2 | |
| HRGMv2_0735_CGC5 | CGCFAM_09771 | Yes | 6 | 1 |
Top CAZyme Families