dbCAN HGM

Cluster: HRGMv2_0735_CGC20

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	HRGMv2_0735_17	HRGMv2_0735_17_3	3303	4214	+	3.A.1.5.2
TC	HRGMv2_0735_17	HRGMv2_0735_17_4	4228	5310	+	3.A.1.5.2
TC	HRGMv2_0735_17	HRGMv2_0735_17_5	5318	6328	+	3.A.1.5.2
TC	HRGMv2_0735_17	HRGMv2_0735_17_6	6321	7316	+	3.A.1.5.35
TC	HRGMv2_0735_17	HRGMv2_0735_17_7	7368	9032	+	3.A.1.5.2
NULL(UNKNOWN)	HRGMv2_0735_17	HRGMv2_0735_17_8	9282	9881	+	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_0735_17	HRGMv2_0735_17_9	10208	11329	-	GT2

Gene ID: HRGMv2_0735_17_3
Type: TC
Location: 3303 - 4214 (+)

Gene ID: HRGMv2_0735_17_4
Type: TC
Location: 4228 - 5310 (+)

Gene ID: HRGMv2_0735_17_5
Type: TC
Location: 5318 - 6328 (+)

Gene ID: HRGMv2_0735_17_6
Type: TC
Location: 6321 - 7316 (+)

Gene ID: HRGMv2_0735_17_7
Type: TC
Location: 7368 - 9032 (+)

Gene ID: HRGMv2_0735_17_8
Type:
Location: 9282 - 9881 (+)

Gene ID: HRGMv2_0735_17_9
Type: CAZyme
Location: 10208 - 11329 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0735_17_8	vegetarian > omnivore	1.31550	0.00143
HRGMv2_0735_17_9	vegetarian > omnivore	1.97755	0.00143
HRGMv2_0735_17_9	vegetarian > vegan	1.11756	0.00608

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0735_17_8	omnivore > flexitarian	1.55101	0.00566