Genome Details
Selected Rep_genome_ID: HRGMv2_0541
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900316565
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0541 | 2,480,300 | 94.09% | 0.05% | Japan | Asia | HRGM |
| MGYG000004622 | 2,570,641 | 95.96% | 0.76% | France | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0541_CGC32 | CGCFAM_00003 | Yes | 6 | 2 | |
| HRGMv2_0541_CGC18 | CGCFAM_00007 | Yes | 7 | 2 | |
| HRGMv2_0541_CGC15 | CGCFAM_00034 | Yes | 8 | 4 | |
| HRGMv2_0541_CGC19 | CGCFAM_00044 | Yes | 11 | 5 | beta-mannan/xylan/beta-glucan |
| HRGMv2_0541_CGC25 | CGCFAM_00082 | Yes | 5 | 2 | beta-mannan |
| HRGMv2_0541_CGC2 | CGCFAM_00181 | Yes | 7 | 2 | |
| HRGMv2_0541_CGC21 | CGCFAM_00197 | Yes | 8 | 1 | |
| HRGMv2_0541_CGC20 | CGCFAM_00241 | Yes | 4 | 3 | |
| HRGMv2_0541_CGC12 | CGCFAM_00266 | Yes | 4 | 1 | |
| HRGMv2_0541_CGC34 | CGCFAM_00589 | Yes | 3 | 1 | |
| HRGMv2_0541_CGC3 | CGCFAM_00808 | Yes | 5 | 1 | |
| HRGMv2_0541_CGC17 | CGCFAM_01611 | Yes | 3 | 2 | |
| HRGMv2_0541_CGC9 | CGCFAM_01798 | Yes | 12 | 1 | |
| HRGMv2_0541_CGC33 | CGCFAM_03565 | Yes | 4 | 1 | |
| HRGMv2_0541_CGC30 | CGCFAM_03741 | Yes | 3 | 1 | |
| HRGMv2_0541_CGC14 | CGCFAM_04006 | Yes | 3 | 1 | |
| HRGMv2_0541_CGC13 | CGCFAM_04696 | Yes | 5 | 2 | |
| HRGMv2_0541_CGC7 | CGCFAM_05965 | Yes | 4 | 1 | |
| HRGMv2_0541_CGC8 | CGCFAM_05969 | Yes | 4 | 1 | |
| HRGMv2_0541_CGC27 | CGCFAM_06016 | Yes | 7 | 2 | |
| HRGMv2_0541_CGC23 | CGCFAM_09710 | Yes | 11 | 3 | |
| HRGMv2_0541_CGC5 | CGCFAM_09711 | Yes | 7 | 3 |
Top CAZyme Families